{ "@context": "http://schema.org/", "@type": "Dataset", "@id": "https://antcat.antarcticanz.govt.nz/geonetwork/srv/api/records/60782a7c-8574-48dc-8b60-e460ab552f9f", "includedInDataCatalog":[{"@type":"DataCatalog","url":"https://antcat.antarcticanz.govt.nz/geonetwork/srv/search#","name":""}], "inLanguage":"eng", "name": "Viral Contigs Predicted from Metagenomes: MAGs, SAGs, and Transcriptome from under the Ross Ice Shelf (HWD2), 2017", "alternateName": [ ], "dateCreated": [ "2023-12-14T00:00:00"], "dateModified": [ ], "datePublished": [ "2023-12-14T00:00:00"], "thumbnailUrl": [ "https://antcat.antarcticanz.govt.nz:/geonetwork/srv/api/records/60782a7c-8574-48dc-8b60-e460ab552f9f/attachments/60782a7c-8574-48dc-8b60-e460ab552f9f.jpg"], "description": "This metadata record represents the data for generated by mining single-cell genomic, transcriptomic, and metagenomic data to uncover the viral diversity, biogeography, activity, and their role as metabolic facilitators of microbes beneath the Ross Ice Shelf.\n\nHot drilling and seawater sampling was conducted from the sub-shelf water column in the central region of the RIS (Latitude \u221280.6577\u2009N, Longitude 174.4626\u2009W). The sampling site was located \u2248300\u2009km from the shelf front. A borehole (30\u2009cm diameter) conducted by hot water drilling was used for direct sampling of seawater from three depths (400\u2009m, 550\u2009m, and 700\u2009m from the top of the shelf, which correspond to 30\u2009m, 180\u2009m, and 330\u2009m from the bottom of the ice shelf, respectively). Seawater samples were processed accordingly for single cell genomics, metagenomics, and transcriptomics as described, and the resulting assembled and co-assembled contigs (min. length 1\u2009kb) from single-amplified genomes, bins and transcriptomics were mined for detecting viral contigs.\n\nFurther details are provided at https:\/\/doi.org\/10.1038\/s41467-023-44028-x\n\nGET DATA: https:\/\/doi.org\/10.6084\/m9.figshare.24581331", "identifier": "https://doi.org/10.6084/m9.figshare.24581331", "keywords":[ "ROSS ICE SHELF","METAGENOMICS","HWD2","K061A","VIRUSES","BACTERIA\/ARCHAEA","ICE SHELVES","Ice Shelf","ANTARCTICA","ASP","Aotearoa New Zealand Ross Ice Shelf Programme" ] ,"creator": [ { "@type":"Person" ,"name": "Lopez-Simon, J." ,"email": [""] ,"contactPoint": { "@type" : "PostalAddress" } } ] ,"publisher": [ { "@type":"Organization" ,"name": "Figshare" ,"email": ["support@figshare.com"] ,"contactPoint": { "@type" : "PostalAddress" } } ] ,"distribution": [ { "@type":"DataDownload", "contentUrl": "https:\/\/doi.org\/10.6084\/m9.figshare.24581331", "encodingFormat": "WWW:LINK-1.0-http--link", "name": "Distribution Metadata" }] ,"encodingFormat": [ ] ,"spatialCoverage": [ {"@type":"Place", "description": [ ], "geo": [ {"@type":"GeoShape", "box": "-80.88 173.077 -80.43 175.84" } ] }] ,"temporalCoverage": [ "2017-12-11T00:00:00/2017-12-19T12:00:00" ] ,"license": [ { "@type": "CreativeWork", "name": "This data set conforms to the CC BY Attribution License (https:\/\/creativecommons.org\/licenses\/by\/4.0\/)" } ] , "citation": "Lopez-Simon, J., Vila-Nistal, M., Rosenova, A., De Corte, D., Baltar, F., Martinez-Garcia, M., ( 2023 ) Viral Contigs Predicted from Metagenomes: MAGs, SAGs, and Transcriptome from under the Ross Ice Shelf (HWD2), 2017. Figshare. https://doi.org/10.6084/m9.figshare.24581331, Accessed: 2026-07-07+12:00" }